GENETICS

    Genetics is the study of inheritance (i.e. the study of the passage of traits from one generation to another).  Genetic traits are carried on chromosomes, which are long molecules of a nucleic acid called DNA.  Each chromosome carries the genetic code for many different traits. Each trait is at a different location on the chromosome.  We call these traits genes.

    Human cells (except for eggs and sperm) each have 46 chromosomes; this is called the diploid number.  Gametes (sperm and eggs) each have 23 chromosomes; this is called the haploid number.  When fertilization occurs  (a sperm and an egg fuse creating a fertilized egg called a zygote) the diploid number of 46 is thereby restored.  The abbreviation for diploid is 2N and for haploid is N.  The diploid chromosomes are found in pairs and are actually two sets of genetic instructions, one from the mother (egg) and the other from the father (sperm). We call these pairs of chromosomes homologous chromosomes, because they carry genes controlling for the same traits. If a chromosome contains a gene for height, its homologue also contains a gene for height. Although homologous chromosomes code for the same traits (e.g. - hair color) they may not code for the same expression of a trait (e.g. - brown vs. blond hair).  The various forms of any one gene are called alleles (using the previous example, blond and brown are both alleles of the hair color trait).   This leads to some terms:

    Homozygous - refers to homologous chromosome pairs that include identical gene(s) or alleles (e.g. both for brown hair).
    Heterozygous - refers to pairs which are different (e.g. 1 brown, & 1 blond)

    Dominant - the prevailing or most potent gene
    Recessive - the non-prevailing or less potent gene
    Traits are abbreviated with a single letter; a capital letter indicates a dominant trait whereas a small letter indicates a recessive trait.  A recessive trait will not be expressed if paired with a dominant trait; therefore recessive traits are only expressed in the homozygous state. 
 
     An individual’s actual genetic makeup, meaning which genes are present is called genotype, whereas their outward appearance due to how the genes are expressed is called their phenotype (phenotype is what you see .. due to the genotype) . Using eye color as an example: B=brown & b=blue. A person could have the following genotypes:
    BB = homozygous brown (or you could say homozygous dominant)
    Bb = heterozygous brown (or you could say heterozygous for eye color)
    bb = homozygous blue (or homozygous recessive)
Note that a homozygous dominant person (BB) has a different genotype than a heterozygote (Bb), however they both have the same phenotype (= brown eyes).

    In humans one pair of the 23 homologous pairs are sex chromosomes the other 22 pairs are called autosomes.  Female sex chromosomes are identical in appearance, code for the same traits, and are designated X and X, while in the male the two sex chromosomes are different and designated X and Y. Sex chromosomes like all chromosomes code for many traits not just an individuals sex, however the Y chromosome is very small and there are very few (~10) other traits carried on the Y.
   
    In the 1860’s an Austrian monk named Gregor Mendel worked out the basic principals of genetics in a series of experiments crossing pea plants.  Mendel developed three basic laws that govern inheritance and hold true to this day.

1) Law of Segregation - In the cells of individuals the genes (& chromosomes) occur in homologous pairs.  In the formation of gametes (sex cells) the homologous chromosomes will separate, thus the genetic traits become separated and the chromosome number is reduced from diploid to haploid.

2) Law of Independent Assortment - When chromosomes segregate, they do so in a random fashion, meaning they separate independently of each other.

3) Law of Recombination - Gametes (haploid) unite at the time of fertilization.  This returns the chromosome number to the diploid in the new generation, and often provides for different genetic combinations than the previous generation. 
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       Usually, if a person experiences difficulty with genetic problems, it is because they fail to get the gametes correctly.
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Genetics Problems:

      1.    Monohybrid cross - A cross that deals with the inheritance of one single trait at a time.

              a)    Tall (T) is dominant over short (t).  If one crosses a homozygous tall plant     with a short plant, what will the F1 generation be like?

                  Provide the following genotypes:
               Parents _______________ x _______________
               Gametes _______  ______ x ______  ________
                    F1 Offspring _______________
                  Now, cross two of the F1 offspring. 
                  Parents ____________ x _____________
                  Gametes _________ ________ _________ _________
                  F2 Offspring _________ _________ _______ ________
                         Give:  Phenotypic Ratio ______________
                         Give:  Genotypic Ratio _______________


     In garden peas, some peas have a smooth (round) seed coat, others are wrinkled.  If one crosses a homozygous round (R) with a wrinkled (r), what will the F1 offspring be like?
                  Provide the following genotypes:
               Parents _______________ x _______________
               Gametes ______________ x _______________
               F1 Offspring ________________________
          Now cross two of the above F1 offspring.

       Parents __________________ x __________________
            Gametes _________________ x __________________
            F1 Offspring _________________________
    Give the phenotypic and genotypic ratios.    ________________________

                            ________________________

              2.  Incomplete Dominance - Sometimes one gene is not completely dominant over its allele. 
                    In certain flowering plants, red (R) is not completely dominant over white (r), and the heterozygote (Rr) is pink. 
                    Cross a red flower with a white flower.

               Parents __________________ x ___________________
               Gametes _________   ________ x _________   ________
               F1 _____________________ (Color: ______________)

                      Now, cross two F1 Offspring:
               Parents  __________________ x __________________
               Gametes ________   _________ x ________   ________
               F2 _________ _________ _________ ___________
               Phenotypic Ratio: ___________________________
               Genotypic Ratio: ____________________________

      3.  Test Cross - If one needs to determine the genotype of an individual, then cross the individual in question to a known recessive. If the individual in question is homozygous dominant, all the F1 offspring will be alike.  If the parent in question is heterozygous, then the F1 offspring will be in a ratio of 1:1 between the test parent and the known recessive.

       A black cat can be B/B or B/b, while a white cat (b/b) is the known recessive.  Do the following testcrosses:
               Parents (Homozygous Black) __________ x _________(white)
               Gametes                            __________ x _________
               F1          ________________________
               Ratio         ______________________


               Parent (Heterozygous Black)  ________ x _________(white)
               Gametes ___________ ___________ x __________
               F1    ______________ _____________
               Ratio _____________________

    4.  Dihybrid Cross - Two different types of traits, located on different pairs of homologous chromosomes are inherited independently, but at the same time.
       Round (R) is dominant over wrinkled (r) coat, while yellow (Y) is dominant over green (y).  Cross a homozygous round, yellow with a wrinkled green.
               Parents _______________ x ______________
               Gametes ______________ x ______________
               F1    ________________
               Phenotype _____________________________
               Genotype _____________________________

        Cross two of the F1 offspring.
               Parents ________________ x ________________
               Gametes _______ _______ x ________ _______
                              ________ _______   ________ _______
               Give the Phenotypic Ratio: ________________



    5.  Sex Ratio - Sex of an individual is determined by the sex chromosomes, and there should be a ratio of one female for each male.  Prove if this is correct for people.  Male XY, Female XX.
               Parent (Father) ___________ x ___________(Mother)
               Gametes          _____________ _____________
                                      _____________ _____________
               F1                _____________ _____________
          Now, cross two F1 individuals.
               Parent (Father) ___________ x ____________(Mother)
               Gametes         ____________ x ____________
               F2            ____________ ____________





6.    Sex-Linked Characteristics - There are many traits carried on the X sex chromosome, while for all practical purposes, there are no traits carried on the Y sex chromosome.


        Colorblindness in people is a sex-linked characteristic, and it is a recessive trait.  If a heterozygous, normal vision, female (carrier) marries a normal vision male, what type of offspring would be expected?

Parents (Father) _______________ x _____________(Mother)
               Gametes _________  _________ x _________ _________
               F1    __________ __________ __________ _________
               Phenotypic Ratio (All children) ____________________
               Genotypic Ratio (Males) _________________________
               Genotypic Ratio (Females) _______________________





         If a "carrier" normal vision female marries a colorblind male, what type of offspring would be expected?

               Parents (Father) ____________ x ____________(Mother)
               Gametes ________  ________ x __________ _________
               F1 _____________ _________ ___________ _________
               Phenotypic Ratio (All children) ___________________
               Genotypic Ratio (Males) ____________________
               Genotypic Ratio (Females) __________________



     7.  Multiple Alleles - when a single trait such as blood type has more than two factors, but only two factors may function at a given time.
          People have four phenotypes of blood-- A, B, AB, and O. However there are 3 alleles involved (A, B, & O), A & B are not dominant over each other (codominant), but they are each dominant over the “O” allele.
                   A may be A/A, A/O
                   B may be B/B, B/O
                   AB is    A/B
                   O is     O/O
          If a heterozygous A female marries a heterozygous B male, what type of offspring would be expected?

               Parents (Father) __________ x __________(Mother)
               Gametes _________ _________ ________ _________
               F1 _________ _________ _________ __________
               Give Genotype ________ ________ ________ ________






    8.  Sex-Influenced Characteristics - Genes in which dominance varies depending on the sex of the individual.  A classical example in people is baldness.
                    Genotype       Men        Women
                       B/B          Bald               Bald
                       B/b          Bald               Non-bald
                       b/b          Non-bald       Non-bald




NOTE: In working these problems, one must include the sex chromosomes in order to keep the genotypes separate.
    A non-bald, normal vision man marries a non-bald, normal vision woman whose father was color-blind and whose mother was bald.  What kinds of offspring may they have, and in what proportions?
               Parents (Father) ______________ x _____________(Mother)
               Gametes _______ _______ x _______ _______ ______ _______
               F1       Use Punnett Square
               Give genotypes for each offspring.


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Genetics review
 *Sex cells = gametes ( sperm & ovum), they have one-half the normal chromosome number, = 23 chromosomes, this is called haploid  (symbol = n) (so gametes have 22 autosomes & 1 sex chromosome)
 *All other body cells contain the normal chromosome number... this is called the diploid chromosome number  ( symbol = 2n)=In humans 2n = 46 chromosomes
 *In a somatic (body) cell the chromosomes are found in pairs called homologous pairs, each parent contributed one-half of each homologous pair.  This means that the sperm contributed 23 homologs and the ovum contributed 23 homologs..then when they unite (fertilization) forming a zygote ( fertilized egg) the diploid number (46) is restored when the homologs pair back up.
 *Since gametes are haploid....the terms homozygous and heterozygous do not
 apply....there are no homologous pairs!
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*T=tall   t=short,   Y=yellow  y=green
Cross a heterozygous yellow plant with a homozygous yellow plant.
What is the genotype ratio and the phenotype ratio of the offspring?
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Parent-- TTYY  Genotype=Homozygous tall,Homozygous Yellow
    Phenotype=Tall - Yellow
    Possible gametes=
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<>Parent--  TtYy  Genotype= Heterozygous for both traits
    Phenotype= Tall-Yellow
Gametes possible from this Parent? --   TtYy
*(Not Tt  or Yy because of Mendel’s !st Law )
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Cross a heterozygous-yellow, homozygous-tall plant with a green-short one.
Parents -- YyTT    *    yytt
Gametes --
 
Do the cross...what percent of the offspring will be green and short?
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If a child is type O, & mother is type B?
What genotypes can the father not be?
What phenotype(s) can he not be?
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Phenylketonuria (PKU) is an inherited disease deteremined by a recessive allele. It a woman and her husband are both carriers, what is the probability that their first child will be normal?
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<>Define:
 Genetics  chromosomes  genes   the three Laws
 diploid   haploid   gametes  monohybrid cross
 alleles   homologous  homozygous  dihybrid cross
 heterozygous  dominant  recessive  incomplete dominance
 genotype  phenotype  autosomes  sex -linked traits
 sex-influenced  multiple alleles (codominant)


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