TOPIC OUTLINE FOR AQUATIC ENVIRONMENT LECTURE

A. Aquatic environments: Inland waters, estuaries, wetlands, and the ocean
     1. Inland waters
          a. Lentic (lacustrine) ecosystems
               (1) Lake basins
               (2) Sediments, varves and lake history
               (3) Basin wetlands (swamps, marshes, vernal pools)
          b. Lotic (fluvial) ecosystems
               (1) General features of streams
               (2) Origin of stream beds, erosion and deposition
               (3) Riverine (riparian) wetlands
     2. Estuaries
          a. General features of estuaries
          b. Types of estuaries
          c. Importance of estuaries
          d. Fringe wetlands (tidal marshes and mangrove swamps) and their importance
     3. The Marine Environment
          a. General features of the ocean
              (1) Importance
              (2) Morphology of basins
                    (a) Continental shelves
                    (b) Continental slope
                    (c) Abyssal plains
                    (d) Submarine canyons
                    (e) Trenches
             (3) Islands and reefs
             (4) Seamounts and guyots
             (5) Beaches
        b. Oceanic sediments
             (1) Primary origins of ocean sediments
                   (a) Lithogeneous
                   (b) Biogeneous
             (2) Shallow-water sediments
                   (a) Terrigenous
                   (b) Biogenic
                   (c) Volcanic
            (3) Deep-water sediments (eupelagic sediments)
                   (a) Biogenic
                   (c) Hydrogenic
                   (b) Red clays
B. Physical limiting factors in aquatic environments
    1. Temperature
        a. General considerations
        b. Thermal properties of lentic ecosystems
        c. Thermal characteristics of lotic ecosystems  (Test to Here)
        d. Thermal properties of estuaries
        e. Thermal features of marine waters
    2. Insolation (solar radiation)
        a. Impact on the biota
        b. Spectral features of light
        c. Penetration and extinction in aquatic ecosystems
            (1) Transparency and absorption
            (2) Reflectance
            (3) Turbidity and color
                  (a) Types, and methods of determination
                  (b) Lakes
                  (c) Streams
                  (d) Estuaries
                  (e) Marine waters
        d. Zonation based on light penetration
            (1) Lakes
            (2) Marine environments
    3. Pressure
        a. Effects of depth on hydrostatic pressure
        b. Effects on organisms
        c. Divisions of marine pelagic environment based on water depth
        d. How organisms adapt to increased hydrostatic pressures of abyssal depths
    4. Hydrodynamics of inland waters
        a. Lentic (lacustrine) environments
            (1) non-periodic current systems
            (2) periodic current systems
        b. Lotic (fluvial) environments
    5. Hydrodynamics of estuaries
        a. Marine vs river dominated estuaries
        b. Evaporite estuaries
    6. Hydrodynamics of marine environments
        a. The atmosphere and surface currents
        b. Coriolis effect on currents
        c. Vertical circulation and upwelling
        d. Waves and tides
C. Chemical limiting factors
    1. Atmospheric gasses
        a. Gas solubility
            (1) Henry's law
            (2) Effects of altitude, temperature and salinity
        b. Atmospheric gases in lakes
            (1) Dissolved oxygen
                  (a) Sources
                  (b) Utilization
                  (c) Vertical distribution
                  (d) Determination
                  (e) Redox potential
            (2) Carbon dioxide
                  (a) Importance
                  (b) Sources
                  (c) Occurrence
            (3) Other lake gases
        c. Atmospheric gases in streams
            (1) Sources and utilization of dissolved oxygen
            (2) Carbon dioxide
            (3) Other gases
        d. Atmospheric gases in estuaries
        e. Dissolved gases in the oceans and vertical circulation
    2. Dissolved solids
        a. General considerations
        b. Ways of measuring dissolved solids
        c. Dissolved solids in inland waters
        d. Dissolved solids in estuaries
        e. Dissolved solids in marine waters (Salinity)
            (1) Sources of sea salts
            (2) Dissolved chemical constituents
        f. Effects of salts on organisms
D. Nutrient cycling and energy flow
    1. Model for nutrient cycling and energy flow in a lake ecosystem
    2. Energy flow in a stream ecosystem
    3. Nutrient cycling and energy flow in marine ecosystems
    4. Wetlands productivity and detrital food chains
E. Collection and analysis of aquatic organisms
    1. Collection and analysis of plankton
    2. Collection and analysis of benthos
    3. Collection and analysis of nekton
F. Biological assessment methods for estimating water quality and environmental conditions
    1. Benthic biodiversity
        a. Indices of diversity
        b. Indicator organisms (Hilsenhoff's species level tolerance characterization system)
        c. Rapid bioassessment protocols (RPBs) adopted by the USEPA
    2. Nekton analysis
        a. Using fish as indictors of pollution
        b. RPBs for fish
    3. Bioassay
        a. Establishing the toxicity of chemicals or effluents (LC50s)
        b. Animal tissue bioassays for the detection of toxicants
        c. Flesh tainting
G. Community structure of aquatic environments
    1. Producers
        a. Chemosynthetic autotrophs (Bacteria)
        b. Photosynthetic autotrophs
            (1) Phytoplankton
            (2) Aquatic macrophytes
            (3) Algae
                  (a) Chlorophyta
                  (b) Chrysophyta
                  (c) Phaeophyta
                  (d) Rhodophyta
                  (e) Dinophyta (Pyrrophyta)
                  (f) Euglenophyta
            (4) Cyanophyta (Diatoms)
            (5) Tracheophyta
                  (a) Primitive tracheophytes
                  (b) Gymnosperms
                  (c) Angiosperms
                  (d) Adaptations of salt marsh plants
    2. Consumers
        a. Zooplankton
            (1) Inland waters
            (2) Estuaries
            (3) Marine
                (a) Holoplankton
                (b) Meroplankton
        b. Nekton
            (1) Inland waters (fish, crustaceans, reptiles)
            (2) Estuaries (anadromous fish, crustaceans)
            (3) Marine (fish, crustaceans, cephalopods, reptiles, mammals)
        c. Zoobenthos
            (1) Lakes and streams
                  (a) Littoral bottom fauna
                  (b) Profundal bottom fauna
                  (c) adaptations of lotic bottom fauna
            (2) Estuaries
                  (a) Adaptations of estuarine benthos
                  (b) Benthic communities on mud flats
                  (c) Benthic communities in mangrove swamps
            (3) Marine
                  (a) Benthic  shelf communities
                       * Rocky shores
                       * Coral Reefs
                       * Sand beaches
                  (b) Deep sea bottom communities